ClickCease 14+ Linux Server Security Best Practices & Solutions

Key Takeaways

  • Many Linux systems remain vulnerable due to misconfigurations, delayed patching, and a lack of proactive defenses.
  • Enable automated updates — especially for security patches — to avoid delays and reduce exposure.
  • KernelCare Enterprise automates Linux kernel patching without requiring reboots or downtime, ensuring continuous protection.

Whether your system is running in a local office or remotely in a data center, security is vital to any environment. Unfortunately, there are often considerable security concerns associated with Linux servers.

More and more systems become compromised on a daily basis. Moreover, vast amounts of users are unaware that proactive server security measures are required to thwart exposure.

In this post, we’ll provide a comprehensive overview of Linux security best practices.

What Is Linux Server Security?

Linux server security refers to the strategies, tools, and policies used to protect servers running on the Linux operating system from unauthorized access, data breaches, and other cyber threats. Despite its robustness, Linux systems are still frequent targets – especially when misconfigured or left unpatched.

That’s why proactive, layered security is essential in modern Linux environments.

The Importance of Linux Security

Linux powers over 80% of cloud infrastructure, making it a growing target for cybercriminals. Attackers are exploiting misconfigured servers, outdated kernels, and exposed services at scale.

It is essential to comply with best practices for Linux security to protect your servers from vulnerabilities and threats.

Linux Attacks Are Increasing

The dominance of Linux in enterprise and cloud environments has unfortunately led to a rise in targeted attacks. Threat actors now target SSH, container workloads, and public-facing services. Many administrators continue to face challenges with timely patching and default insecure settings.

Compliance Demands It

Regulatory frameworks like HIPAA, PCI DSS, and GDPR require strict server hardening, timely patching, and auditability. A single overlooked vulnerability can lead to massive fines and reputational damage — especially if patient data or financial records are exposed on a Linux server.

Common Vulnerabilities Found in Linux Servers

Linux servers are often compromised through known CVEs, misconfigurations, and outdated packages. Attackers don’t need to find new zero-days — they just exploit what’s already exposed.

Unpatched CVEs

Unpatched kernel vulnerabilities like Dirty Pipe (CVE-2022-0847) or Stack Rot (CVE-2023-3269) can give attackers root access. Many admins delay patching due to reboot concerns, leaving critical flaws exposed. TuxCare’s KernelCare Enterprise rebootless patching solves this by applying fixes live, without downtime.

Open Ports and Exposed Services

Default installations often leave unused services running on open ports — perfect entry points for attackers. SSH on port 22, exposed database ports, or forgotten dev tools can be exploited quickly if not locked down or monitored with tools like Linux intrusion detection.

Outdated Packages and Repositories

Stale packages from outdated or unofficial repositories can introduce insecure dependencies. Attackers often target known Linux vulnerabilities in old software stacks — especially web servers, mail services, and control panels.

Malware and Backdoors

Linux malware is evolving. Modern threats use rootkits, cryptominers, and SSH backdoors that remain hidden in plain sight. Regular scans and behavioral analysis are key to detection.

Top Linux Server Security Best Practices

To ensure that your Linux servers remain secure, it is crucial to set up systems that reduce risk at every level: the kernel, services, users, and beyond.

The following security tips can help enterprise companies across all industries to protect their servers, remain compliant, and avoid extensive and unnecessary system downtime.

1. Take Inventory of all Software and Hardware

It would be an enterprise’s advantage to take across-the-board inventory of all software and hardware within their infrastructure.

With a clear view of the software running and hardware in operation, it becomes much simpler to compare known vulnerabilities and establish which patches are the most critical. It also helps eliminate outdated or unused software, reducing your attack surface.

2. Assign Risk Levels

Patching the wrong systems can be costly for an enterprise, unnecessarily eating up precious time, money, and resources. Although each system should be patched, assigning risk levels to each item in your inventory and prioritizing those that are more substantially vulnerable will better protect exposed items from attack.

You can use TuxCare Radar to prioritize vulnerabilities through AI-assisted risk analysis. This tool evaluates CVSS scores, patch availability, real-time threat intelligence, and more, helping you focus on the most critical vulnerabilities and make informed security decisions.

3. Perform Regular Software Updates

An enterprise must perform regular software patches to its Linux server to address the vulnerabilities that may arise. To their detriment, Linux users commonly fail to implement such patches. Lacking timely updates can result in software that is easily exploited by hackers.

4. Enable Automatic Updates

In addition to regular software updates, enterprises should enable automatic software updates.

An automated update approach can alleviate the stresses associated with addressing multiple required security updates. Furthermore, with automatic updates, an enterprise’s software security measures will stay up to date without requiring any extra attention or user resources.

5. Implement KernelCare Enterprise

With rebootless vulnerability patching for Linux servers and devices, TuxCare’s KernelCare Enterprise prevents dangerous patch delays. KernelCare is the first defender of Linux kernels, allowing enterprises to say goodbye to rebooting servers.

No longer requiring IT teams to deliver patch updates in the night or coordinate extensive downtime, KernelCare ensures that patches are applied safely and promptly, allowing enterprises to stay compliant and protected from threats.

6. Use SELinux or AppArmor

Mandatory Access Control (MAC) systems like SELinux (used in RHEL/CentOS) or AppArmor (default on Ubuntu/Debian) enforce strict policies that limit what processes can do — even if compromised. Keep them enabled and properly configured to contain attacks.

7. Configure a Firewall

Even basic firewall rules can drastically reduce exposure. Tools like iptables and nftables, ufw or firewalld help block unused ports, limit access to specific IPs, and control incoming or outgoing traffic.

8. Harden Access and Mitigate Risk

Applying patches can often require a considerable amount of time, especially when the patch’s necessary modifications to function are more substantial. Under such circumstances, enterprises should do what they can to mitigate risk.

The best way to do so is to limit the impact and likelihood of an exploit while the patch is being installed until it can be applied safely and adequately.

9. Enforce Least Privilege

Limit user access to exactly what’s needed — no more, no less. Use sudo instead of granting full root access, and review permission levels regularly. This minimizes the damage any compromised account can do.

10. Enforce Strong Authentication

Implement strong password policies, disable password-based SSH logins in favor of key-based authentication, and use tools like Fail2ban to block brute-force attacks. Additionally, enable multi-factor authentication (MFA) to provide an extra layer of security, ensuring that, even if credentials are compromised, unauthorized access is still prevented.

11. Monitor Logs and Enable Intrusion Detection

Deploy tools like auditd, OSSEC, or AIDE to monitor system logs and detect suspicious activity early. Pair log monitoring with log forwarding and real-time alerts to ensure a timely response to incidents.

Image from https://www.ossec.net/ossec-gui-dashboard/

12. Consolidate Software

Although often intriguing, new software is not always necessary. Utilizing several versions of one piece of software can put an organization at an elevated risk of exposure. As time goes on, efficient systems can stall or become bloated due to unfeasible, unused, redundant programs. “The added benefit to selecting a minimal install is that the system’s footprint is also minimal.”

Additionally, performing a system-wide audit yearly can help enterprises optimize their servers, allowing them to continue running as efficiently as possible, even with new programs.

13. Backups and Testing

Linux servers must perform offsite backups, as they can safeguard the access of essential data in the event of a security threat.

Such backups are crucial, mainly to protect Linux servers from ransomware attacks. Although these backups cannot prevent ransomware attacks altogether, they can ensure that the resulting damages will be limited, providing critical data access.

Moreover, it is imperative to test a new patch before applying it to all servers. Each environment is distinct. As a result, any patch can lead to issues that may potentially crash your servers. Many enterprises apply the patch to a small subset of their systems to avoid this, ensuring that no significant problems exist.

14. Execute Security Audits

As much as an enterprise may try to enhance their Linux server security, threats can still loom. If not properly and regularly upgraded, even the most secure servers can fall victim to cybersecurity threats.

Security audits highlight existing gaps and establish the best routes for addressing such issues, allowing your server to stay protected.

Real-World Examples of Linux Server Attacks

Exim Mail Server Vulnerability (CVE-2019-10149)

In 2019, a critical flaw in the Exim mail server allowed remote attackers to execute commands as root. The exploit targeted Linux servers with outdated versions of Exim, impacting thousands of systems. Despite a patch being released quickly, slow adoption left many servers exposed.

Dirty Pipe (CVE-2022-0847)

Discovered in 2022, Dirty Pipe (CVE-2022-0847) was a critical kernel vulnerability affecting Linux versions 5.8 and above. It allowed unprivileged users to overwrite read-only files and escalate privileges to root. Despite being a local flaw, its ease of exploitation made it highly dangerous — especially in shared hosting environments.

Secure Linux Servers With TuxCare

Securing a Linux server is never a one-time task — it’s an ongoing process of patching, hardening, and auditing. With the right strategy and tools, you can stay ahead of threats without sacrificing uptime.

Giving your Linux server an extra boost of security with KernelCare will keep it protected from threats and eliminate vulnerabilities while saving your business time, money, and resources. Remember, comprehensive management and implementation of patches are critical to ensuring server security.

For tips regarding maintaining compliance and ensuring safety with automated patch management, reach out to our Linux security experts.

Summary
10+ Linux Server Security Best Practices & Solutions
Article Name
10+ Linux Server Security Best Practices & Solutions
Description
Explore essential Linux server security best practices to safeguard your enterprise systems. Learn about proactive measures, common vulnerabilities, and tools like TuxCare's KernelCare for effective protection.
Author
Publisher Name
TuxCare
Publisher Logo

Looking to automate vulnerability patching without kernel reboots, system downtime, or scheduled maintenance windows?

Table of Contents

Get the open-source security answers you need

Join Our Popular Newsletter

Join 4,500+ Linux & Open Source Professionals!

2x a month. No spam.